Collection: Publications
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Are we there yet with XNA aptamers?
Chaillou S, Thonon S, Reynders S, Lescrinier E, Pinheiro VB. RSC Advances (2026).
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LiraSearch-ultrafast ligand shape and electrostatic matching server
Montalvao RW, Bray S, Verissimo-Alves M, Cubero E, Gruning B, Pinheiro VB. Bioinformatics Advances (2026).
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A versatile platform for combinatorial antibody library cloning and NGS-based quality control with high accuracy
Zhang Z, D’Hondt S, Van der Kant R, Hermans G, Geukens N, Pinheiro VB, Schymkowitz J, Rousseau F, Dewilde M.…
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Beyond CEN.PK – parallel engineering of selected S. cerevisiae strains reveals that superior chassis strains require different engineering approaches for limonene production
Zhu Y, Yogiswara S, Willekens A, Gérardin A, Lavigne R, Goossens A, Pinheiro V, Dai Z, Verstrepen K. Metabolic Engineering…
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The pucke.rs toolkit to facilitate sampling the conformational space of biomolecular monomers
Rihon J, Reynders S, Pinheiro VB, Lescrinier E. Journal of Cheminformatics (2025).
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From competition to cure: the development of live biotherapeutic products for anticancer therapy in the iGEM competition
Van den Berghe L, Masschelein J, Bernardes Pinheiro V. Frontiers in Bioengineering and Biotechnology (2024).
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Melodia: a Python library for protein structure analysis
Montalvao R, Pitt W, Bernardes Pinheiro V, Blundell T. Bioinformatics (2024).
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Navigating directed evolution efficiently: optimizing selection conditions and selection output analysis
Handal-Marquez P, Nguyen H, Pinheiro VB. Frontiers in Molecular Biosciences (2024).
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Rational evolution for altering the ligand preference of estrogen receptor alpha
Eerlings R, Gupta P, Lee XJ, Nguyen T, El Kharraz S, Handle F, Smeets E, Moris L, Devlies W, Vandewinkel…
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Structural insights into the morpholino nucleic acid/RNA duplex using the new XNA builder Ducque in a molecular modeling pipeline
Rihon J, Mattelaer CA, Montalvao RW, Froeyen M, Pinheiro VB, Lescrinier E. Nucleic Acids Research (2024).